|
Aderem, A., & Ulevitch, R. J. (2000). Toll-like receptors in the induction of the innate immune response. Nature, 406(6797), 782-787. https://doi.org/10.1038/35021228 Aguilera, A., & Gonzalez-Gil, S. (2001). Lectin analysis of surface saccharides during the cell cycle in four dinoflagellate species. Journal of Experimental Marine Biology and Ecology, 256(2), 149-166. https://doi.org/10.1016/s0022-0981(00)00311-7 Akimoto, S., Teshigahara, A., Yokono, M., Mimuro, M., Nagao, R., & Tomo, T. (2014). Excitation relaxation dynamics and energy transfer in fucoxanthin-chlorophyll a/c-protein complexes, probed by time-resolved fluorescence. Biochimica et Biophysica Acta, 1837(9), 1514-1521. https://doi.org/10.1016/j.bbabio.2014.02.002 Allen, A. K., Bolwell, G. P., Brown, D. S., Sidebottom, C., & Slabas, A. R. (1996). Potato lectin: a three-domain glycoprotein with novel hydroxyproline-containing sequences and sequence similarities to wheat-germ agglutinin. The International Journal of Biochemistry & Cell Biology, 28(11), 1285-1291. https://doi.org/10.1016/s1357-2725(96)00043-x Aro, E. M., Virgin, I., & Andersson, B. (1993). Photoinhibition of photosystem II. Inactivation, protein damage and turnover. Biochimica et Biophysica Acta, 1143(2), 113-134. https://doi.org/10.1016/0005-2728(93)90134-2 Asensio, J. L., Canada, F. J., Siebert, H. C., Laynez, J., Poveda, A., Nieto, P. M., Soedjanaamadja, U. M., Gabius, H. J., & Jimenez-Barbero, J. (2000). Structural basis for chitin recognition by defense proteins: GlcNAc residues are bound in a multivalent fashion by extended binding sites in hevein domains. Chemical Biology, 7(7), 529-543. https://doi.org/10.1016/s1074-5521(00)00136-8 Ballesteros, L. V., Matthews, J. L., & Hoeksema, B. W. (2018). Pollution and coral damage caused by derelict fishing gear on coral reefs around Koh Tao, Gulf of Thailand. Marine Pollution Bulletin, 135, 1107-1116. https://doi.org/10.1016/j.marpolbul.2018.08.033 Banaszak, A. T., LaJeunesse, T. C., & Trench, R. K. (2000). The synthesis of mycosporine-like amino acids (MAAs) by cultured, symbiotic dinoflagellates. Journal of Experimental Marine Biology and Ecology, 249(2), 219-233. https://doi.org/10.1016/S0022-0981(00)00192-1 Barre, A., Simplicien, M., Benoist, H., Van Damme, E. J. M., & Rouge, P. (2019). Mannose-specific lectins from marine algae: diverse structural scaffolds associated to common virucidal and anti-cancer properties. Marine Drugs, 17(8), 1-25. https://doi.org/10.3390/md17080440 Bayer, T., Aranda, M., Sunagawa, S., Yum, L. K., DeSalvo, M. K., Lindquist, E., Coffroth, M. A., Voolstra, C. R., & Medina, M. (2012). Symbiodinium transcriptomes: genome insights into the dinoflagellate symbionts of reef-building corals. Public Library of Science One, 7(4), e35269, 1-14. https://doi.org/10.1371/journal.pone.0035269 Binsarhan, M. (2016). Comparative analysis and culturing of the microbial community of Aiptasia pallida, a sea anemone model for coral biology. Master’s thesis, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia. 1-50. https://doi.org/10.25781/KAUST-56W1R Blackall, L. L., Wilson, B., & Van Oppen, M. J. (2015). Coral—the world's most diverse symbiotic ecosystem. Molecular Ecology, 24(21), 5330-5347. https://doi.org/10.1111/mec.13400 Blanchard, B., Nurisso, A., Hollville, E., Tetaud, C., Wiels, J., Pokorna, M., Wimmerova, M., Varrot, A., & Imberty, A. (2008). Structural basis of the preferential binding for globo-series glycosphingolipids displayed by Pseudomonas aeruginosa lectin I. Journal of Molecular Biology, 383(4), 837-853. https://doi.org/10.1016/j.jmb.2008.08.028 Bodył, A., & Moszczyński, K. (2006). Did the peridinin plastid evolve through tertiary endosymbiosis? A hypothesis. European Journal of Phycology, 41(4), 435-448. https://doi.org/10.1080/09670260600961080 Boldt, L., Yellowlees, D., & Leggat, W. (2012). Hyperdiversity of genes encoding integral light-harvesting proteins in the dinoflagellate Symbiodinium sp. Public Library of Science One, 7(10), e47456, 1-13. https://doi.org/10.1371/journal.pone.0047456 Brennan, J. J., Messerschmidt, J. L., Williams, L. M., Matthews, B. J., Reynoso, M., & Gilmore, T. D. (2017). Sea anemone model has a single Toll-like receptor that can function in pathogen detection, NF-κB signal transduction, and development. Proceedings of the National Academy of Sciences, 114(47), E10122-E10131. https://doi.org/10.1073/pnas.1711530114 Brodnicke, O., Bourne, D., Heron, S., Pears, R., Stella, J., Smith, H., & Willis, B. (2019). Unravelling the links between heat stress, bleaching and disease: fate of tabular corals following a combined disease and bleaching event. Coral Reefs, 38(4), 591-603. https://doi.org/10.1007/s00338-019-01813-9 Brotosudarmo, T. H., Mackowski, S., Hofmann, E., Hiller, R. G., Brauchle, C., & Scheer, H. (2008). Relative binding affinities of chlorophylls in peridinin-chlorophyll-protein reconstituted with heterochlorophyllous mixtures. Photosynthesis Research, 95(2-3), 247-252. https://doi.org/10.1007/s11120-007-9277-7 Brown, B., Ambarsari, I., Warner, M., Fitt, W., Dunne, R., Gibb, S., & Cummings, D. (1999). Diurnal changes in photochemical efficiency and xanthophyll concentrations in shallow water reef corals: evidence for photoinhibition and photoprotection. Coral Reefs, 18(2), 99-105. https://doi.org/10.1007/s003380050163 Büchel, C. (2003). Fucoxanthin-chlorophyll proteins in diatoms: 18 and 19 kDa subunits assemble into different oligomeric states. Biochemistry, 42(44), 13027-13034. https://doi.org/10.1021/bi0349468. Bucher, M., Wolfowicz, I., Voss, P. A., Hambleton, E. A., & Guse, A. (2016). Development and sSymbiosis establishment in the cnidarian endosymbiosis model Aiptasia sp. Scientific Reports, 6(1), 1-11. https://doi.org/10.1038/srep19867 Carreto, J. I., & Carignan, M. O. (2011). Mycosporine-like amino acids: relevant secondary metabolites. Chemical and ecological aspects. Marine Drugs, 9(3), 387-446. https://doi.org/10.3390/md9030387 Cescon, M., Gattazzo, F., Chen, P., & Bonaldo, P. (2015). Collagen VI at a glance. Journal of Cell Science, 128(19), 3525-3531. https://doi.org/10.1242/jcs.169748 Chadwick‐Furman, N. E. (1996). Reef coral diversity and global change. Global Change Biology, 2(6), 559-568. https://doi.org/10.1111/j.1365-2486.1996.tb00067.x Chen, C. S., Chen, C. Y., Ravinath, D. M., Bungahot, A., Cheng, C. P., & You, R. I. (2018). Functional characterization of chitin-binding lectin from Solanum integrifolium containing anti-fungal and insecticidal activities. BMC Plant Biology, 18(1), 1-11. https://doi.org/10.1186/s12870-017-1222-0 Chen, J. K., Shen, C. R., & Liu, C. L. (2010). N-acetylglucosamine: production and applications. Marine Drugs, 8(9), 2493-2516. https://doi.org/10.3390/md8092493 Chiu, H.-Y., Lin, L.-Y., Chen, Y., Liu, E.-R., & Li, H.-H. (2020). A new method for collecting large mmounts of symbiotic gastrodermal cells from Octocorals. International Journal of Molecular Sciences, 21(11), 3911, 1-14. https://doi.org/10.3390/ijms21113911 Clowez, S., Renicke, C., Pringle, J. R., & Grossman, A. R. (2021). Impact of menthol on growth and photosynthetic function of Breviolum minutum (dinoflagellata, dinophyceae, symbiodiniaceae) and interactions with its Aiptasia host. Journal of Phycology, 57(1), 245-257. https://doi.org/10.1111/jpy.13081 Cousin, J. M., & Cloninger, M. J. (2016). The role of galectin-1 in cancer progression, and synthetic multivalent systems for the study of galectin-1. International Journal of Molecular Sciences, 17(9), 1566, 1-22. https://doi.org/10.3390/ijms17091566 Dall'Osto, L., Bressan, M., & Bassi, R. (2015). Biogenesis of light harvesting proteins. Biochimica et Biophysica Acta, 1847(9), 861-871. https://doi.org/10.1016/j.bbabio.2015.02.009 Dani, V., Priouzeau, F., Pagnotta, S., Carette, D., Laugier, J.-P., & Sabourault, C. (2016). Thermal and menthol stress induce different cellular events during sea anemone bleaching. Symbiosis, 69(3), 175-192. https://doi.org/10.1007/s13199-016-0406-y Daugbjerg, N., Andreasen, T., Happel, E., Pandeirada, M. S., Hansen, G., Craveiro, S. C., Calado, A. J., & Moestrup, Ø. (2014). Studies on woloszynskioid dinoflagellates VII. Description of Borghiella andersenii sp. nov.: light and electron microscopy and phylogeny based on LSU rDNA. European Journal of Phycology, 49(4), 436-449. https://doi.org/10.1080/09670262.2014.969781 Davy, S. K., Allemand, D., & Weis, V. M. (2012). Cell biology of cnidarian-dinoflagellate symbiosis. Microbiology and Molecular Biology Reviews, 76(2), 229-261. https://doi.org/10.1128/MMBR.05014-11 De la Coba, F., Aguilera, J., Figueroa, F. L., De Gálvez, M., & Herrera, E. (2009). Antioxidant activity of mycosporine-like amino acids isolated from three red macroalgae and one marine lichen. Journal of Applied Phycology, 21(2), 161-169. https://doi.org/10.1007/s10811-008-9345-1 de Vitry, C., Olive, J., Drapier, D., Recouvreur, M., & Wollman, F.A. (1989). Posttranslational events leading to the assembly of photosystem II protein complex: a study using photosynthesis mutants from Chlamydomonas reinhardtii. The Journal of Cell Biology, 109(3), 991-1006. https://doi.org/10.1083/jcb.109.3.991 Dehghani, H., Ghavam Mostafavi, P., Fatemi, S. M. R., & Fallah Mehrabadi, J. (2018). Molecular diversity of Symbiodinium spp. within six coral species in Larak Island, the Persian Gulf. Iranian Journal of Fisheries Sciences, 17(1), 151-161. https://doi.org/10.22092/IJFS.2018.115591 Delamare-Deboutteville, J., Dove, S., & Rosic, N. (2020). Heat stress in symbiotic dinoflagellates: signalling towards life or death? Authorea, 1-18. https://doi.org/10.22541/au.158896259.96523538 Di Valentin, M., Salvadori, E., Agostini, G., Biasibetti, F., Ceola, S., Hiller, R., Giacometti, G. M., & Carbonera, D. (2010). Triplet–triplet energy transfer in the major intrinsic light-harvesting complex of Amphidinium carterae as revealed by ODMR and EPR spectroscopies. Biochimica et Biophysica Acta -Bioenergetics, 1797(10), 1759-1767. https://doi.org/10.1016/j.bbabio.2010.06.011 Dimos, B. A., Butler, C. C., Ricci, C. A., MacKnight, N. J., & Mydlarz, L. D. (2019). Responding to threats both foreign and domestic: NOD-like receptors in corals. Integrative and Comparative Biology, 59(4), 819-829. https://doi.org/10.1093/icb/icz111 Dorrell, R. G., & Howe, C. J. (2015). Integration of plastids with their hosts: lessons learned from dinoflagellates. Proceedings of the National Academy of Sciences, 112(33), 10247-10254. https://doi.org/10.1073/pnas.1421380112 Douglas, A. (2003). Coral bleaching––how and why? Marine Pollution Bulletin, 46(4), 385-392. Dove, S., Hoegh-Guldberg, O., & Ranganathan, S. (2001). Major colour patterns of reef-building corals are due to a family of GFP-like proteins. Coral Reefs, 19(3), 197-204. https://doi.org/10.1016/S0025-326X(03)00037-7 Dove, S. G., Takabayashi, M., & Hoegh-Guldberg, O. (1995). Isolation and partial characterization of the pink and blue pigments of Pocilloporid and Acroporid corals. Biology Bulletin, 189(3), 288-297. https://doi.org/10.2307/1542146 Downs, C. A., Fauth, J. E., Halas, J. C., Dustan, P., Bemiss, J., & Woodley, C. M. (2002). Oxidative stress and seasonal coral bleaching. Free Radical Biology and Medicine, 33(4), 533-543. https://doi.org/10.1016/s0891-5849(02)00907-3 Dubinsky, Z., & Stambler, N. (1996). Marine pollution and coral reefs. Global Change Biology, 2(6), 511-526. https://doi.org/10.1111/j.1365-2486.1996.tb00064.x DuBuc, T. Q., Traylor-Knowles, N., & Martindale, M. Q. (2014). Initiating a regenerative response; cellular and molecular features of wound healing in the cnidarian Nematostella vectensis. BMC Biology, 12(1), 24, 1-21. https://doi.org/10.1186/1741-7007-12-24 Duchen, M. R. (2000). Mitochondria and calcium: from cell signalling to cell death. The Journal of Physiology, 529 Pt 1(1), 57-68. https://doi.org/10.1111/j.1469-7793.2000.00057.x Dungan, A. M., Bulach, D., Lin, H., van Oppen, M. J. H., & Blackall, L. L. (2021). Development of a free radical scavenging bacterial consortium to mitigate oxidative stress in cnidarians. Microbial Biotechnology, 14(5), 2025-2040. https://doi.org/10.1111/1751-7915.13877 Dunlap, W. C., & Yamamoto, Y. (1995). Small-molecule antioxidants in marine organisms: antioxidant activity of mycosporine-glycine. Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology, 112(1), 105-114. https://doi.org/10.1016/0305-0491(95)00086-N Eakin, C. M., Sweatman, H., & Brainard, R. E. (2019). The 2014–2017 global-scale coral bleaching event: insights and impacts. Coral Reefs, 38(4), 539-545. https://doi.org/10.1007/s00338-019-01844-2 Edreva, A. (2005). Generation and scavenging of reactive oxygen species in chloroplasts: a submolecular approach. Agriculture, Ecosystems & Environment, 106(2-3), 119-133. https://doi.org/10.1016/j.agee.2004.10.022 Elnour, H., Dietzel, L., Ramanan, C., Buchel, C., van Grondelle, R., & Kruger, T. P. J. (2018). Energy dissipation mechanisms in the FCPb light-harvesting complex of the diatom Cyclotella meneghiniana. Biochimica et Biophysica Acta - Bioenergetics, 1859(10), 1151-1160. https://doi.org/10.1016/j.bbabio.2018.07.009 Emery, M. A., Dimos, B. A., & Mydlarz, L. D. (2021). Cnidarian pattern recognition receptor repertoires reflect both phylogeny and life history traits. Frontiers in Immunology, 12, 689463, 1-14. https://doi.org/10.3389/fimmu.2021.689463 Endo, Y., Takahashi, M., & Fujita, T. (2006). Lectin complement system and pattern recognition. Immunobiology, 211(4), 283-293. https://doi.org/10.1016/j.imbio.2006.01.003 Figueroa, R., Howe-Kerr, L., & Correa, A. (2021). Direct evidence of sex in symbiodiniaceae and a hypothesis about meiosis. Scientific Reports, 11, 18838, 1-17. https://doi.org/10.1038/s41598-021-98148-9 Fransolet, D., Roberty, S., Herman, A. C., Tonk, L., Hoegh-Guldberg, O., & Plumier, J. C. (2013). Increased cell proliferation and mucocyte density in the sea anemone Aiptasia pallida recovering from bleaching. Public Library of Science One, 8(5), e65015, 1-7. https://doi.org/10.1371/journal.pone.0065015 Frederiksen, R. F., Yoshimura, Y., Storgaard, B. G., Paspaliari, D. K., Petersen, B. O., Chen, K., Larsen, T., Duus, J. Ø., Ingmer, H., & Bovin, N. V. (2015). A diverse range of bacterial and eukaryotic chitinases hydrolyzes the LacNAc (Galβ1–4GlcNAc) and LacdiNAc (GalNAcβ1–4GlcNAc) motifs found on vertebrate and insect cells. Journal of Biological Chemistry, 290(9), 5354-5366. https://doi.org/10.1074/jbc.M114.607291 Fujita, T. (2002). Evolution of the lectin-complement pathway and its role in innate immunity. Nature Reviews Immunology, 2(5), 346-353. https://doi.org/10.1038/nri800 Fujita, T., Matsushita, M., & Endo, Y. (2004). The lectin‐complement pathway–its role in innate immunity and evolution. Immunological Reviews, 198(1), 185-202. https://doi.org/10.1111/j.0105-2896.2004.0123.x Gao, C., Hanes, M. S., Byrd-Leotis, L. A., Wei, M., Jia, N., Kardish, R. J., McKitrick, T. R., Steinhauer, D. A., & Cummings, R. D. (2019). Unique binding specificities of proteins toward isomeric asparagine-linked glycans. Cell Chemical Biology, 26(4), e534, 535-547. https://doi.org/10.1016/j.chembiol.2019.01.002 Geijtenbeek, T. B., & Gringhuis, S. I. (2009). Signalling through C-type lectin receptors: shaping immune responses. Nature Reviews Immunology, 9(7), 465-479. https://doi.org/10.1038/nri2569 Genin, E. C., Geillon, F., Gondcaille, C., Athias, A., Gambert, P., Trompier, D., & Savary, S. (2011). Substrate specificity overlap and interaction between adrenoleukodystrophy protein (ALDP/ABCD1) and adrenoleukodystrophy-related protein (ALDRP/ABCD2). Journal of Biological Chemistry, 286(10), 8075-8084. https://doi.org/10.1074/jbc.M110.211912 Gierz, S. L., Gordon, B. R., & Leggat, W. (2016). Integral light-harvesting complex expression in Symbiodinium within the coral Acropora aspera under thermal stress. Scientific Reports, 6(1), 1-10. https://doi.org/10.1038/srep25081 Glynn, P. W. (1996). Coral reef bleaching: facts, hypotheses and implications. Global Change Biology, 2(6), 495-509. https://doi.org/10.1111/j.1365-2486.1996.tb00063.x Gornik, S. G., Ford, K. L., Mulhern, T. D., Bacic, A., McFadden, G. I., & Waller, R. F. (2012). Loss of nucleosomal DNA condensation coincides with appearance of a novel nuclear protein in dinoflagellates. Current Biology, 22(24), 2303-2312. https://doi.org/10.1016/j.cub.2012.10.036 Green, B. R. (2011). Chloroplast genomes of photosynthetic eukaryotes. Plant Journal, 66(1), 34-44. https://doi.org/10.1111/j.1365-313X.2011.04541.x Grishin, A., Krivozubov, M., Karyagina, A., & Gintsburg, A. (2015). Pseudomonas aeruginosa lectins as targets for novel antibacterials. Acta Naturae, 7(2), 25, 29-41. https://doi.org/10.32607/20758251-2015-7-2-29-41 Haeseler, G., Maue, D., Grosskreutz, J., Bufler, J., Nentwig, B., Piepenbrock, S., Dengler, R., & Leuwer, M. (2002). Voltage-dependent block of neuronal and skeletal muscle sodium channels by thymol and menthol. European Journal of Anaesthesiology, 19(8), 571-579. https://doi.org/10.1017/s0265021502000923 Hamada, M., Shoguchi, E., Shinzato, C., Kawashima, T., Miller, D. J., & Satoh, N. (2013). The complex NOD-like receptor repertoire of the coral Acropora digitifera includes novel domain combinations. Molecular Biology and Evolution, 30(1), 167-176. https://doi.org/10.1093/molbev/mss213 Hanover, J. A. (2001). Glycan-dependent signaling: O-linked N-acetylglucosamine. Federation of American Societies for Experimental Biology Journal, 15(11), 1865-1876. https://doi.org/10.1096/fj.01-0094rev Hans, M., Wilhelm, M., & Swandulla, D. (2012). Menthol suppresses nicotinic acetylcholine receptor functioning in sensory neurons via allosteric modulation. Chemical Senses, 37(5), 463-469. https://doi.org/10.1093/chemse/bjr128 Hart, G. W. (1997). Dynamic O-linked glycosylation of nuclear and cytoskeletal proteins. Annual Review of Biochemistry, 66(1), 315-335. https://doi.org/10.1146/annurev.biochem.66.1.315 Hartweck, L. M., Scott, C. L., & Olszewski, N. E. (2002). Two O-linked N-acetylglucosamine transferase genes of Arabidopsis thaliana L. Heynh. have overlapping functions necessary for gamete and seed development. Genetics, 161(3), 1279-1291. https://doi.org/10.1093/genetics/161.3.1279 Hennige, S. J., McGinley, M. P., Grottoli, A. G., & Warner, M. E. (2011). Photoinhibition of Symbiodinium spp. within the reef corals Montastraea faveolata and Porites astreoides: implications for coral bleaching. Marine Biology, 158(11), 2515-2526. https://doi.org/10.1007/s00227-011-1752-1 Hernandez, J. D., & Baum, L. G. (2002). Ah, sweet mystery of death! Galectins and control of cell fate. Glycobiology, 12(10), 127-136. https://doi.org/10.1093/glycob/cwf081 Hill, R., Brown, C. M., DeZeeuw, K., Campbell, D. A., & Ralph, P. J. (2011). Increased rate of D1 repair in coral symbionts during bleaching is insufficient to counter accelerated photo‐inactivation. Limnology and Oceanography, 56(1), 139-146. https://doi.org/10.4319/lo.2011.56.1.0139 Hill, R., Larkum, A., Prášil, O., Kramer, D., Szabó, M., Kumar, V., & Ralph, P. (2012). Light-induced dissociation of antenna complexes in the symbionts of scleractinian corals correlates with sensitivity to coral bleaching. Coral Reefs, 31(4), 963-975. https://doi.org/10.1007/s00338-012-0914-z Hill, R., Szabó, M., ur Rehman, A., Vass, I., Ralph, P. J., & Larkum, A. W. (2014). Inhibition of photosynthetic CO2 fixation in the coral Pocillopora damicornis and its relationship to thermal bleaching. Journal of Experimental Biology, 217(12), 2150-2162. https://doi.org/10.1242/jeb.100578 Hiller, R. G., Wrench, P. M., & Sharples, F. P. (1995). The light‐harvesting chlorophyll a‐c‐binding protein of dinoflagellates: a putative polyprotein. Federation of European Biochemical Societies Letters, 363(1-2), 175-178. https://doi.org/10.1016/0014-5793(95)00297-M Hoffman, G. E., Sanchez Puerta, M. V., & Delwiche, C. F. (2011). Evolution of light-harvesting complex proteins from Chl c-containing algae. BMC Evolutionary Biology, 11(1), 101. https://doi.org/10.1186/1471-2148-11-101 Hedllckova ‐Cela, E., Plzak, J., Holikova, Z., Dvorankova, B., & Smtana JR, K. (2001). Postmitotic basal cells in squamous cell epithelia are identified with Dolichos biflorus agglutinin–functional consequences Note. Acta Pathologica, Microbiologica et Immunologica Scandinavica, 109(10), 714-720. https://doi.org/10.1034/j.1600-0463.2001.d01-137.x Hughes, R. C. (2001). Galectins as modulators of cell adhesion. Biochimie, 83(7), 667-676. https://doi.org/10.1016/S0300-9084(01)01289-5 Imanian, B., Pombert, J.-F., Dorrell, R. G., Burki, F., & Keeling, P. J. (2012). Tertiary endosymbiosis in two dinotoms has generated little change in the mitochondrial genomes of their dinoflagellate hosts and diatom endosymbionts. Public Library of Science ONE, 7(8): e43763, 1-13. https://doi.org/10.1371/journal.pone.0043763 Imberty, A., Gautier, C., Lescar, J., Perez, S., Wyns, L., & Loris, R. (2000). An unusual carbohydrate binding site revealed by the structures of two Maackia amurensis lectins complexed with sialic acid-containing oligosaccharides. Journal of Biological Chemistry, 275(23), 17541-17548. https://doi.org/10.1074/jbc.M000560200 Ishida, K.-i., & Green, B. R. (2002). Second-and third-hand chloroplasts in dinoflagellates: phylogeny of oxygen-evolving enhancer 1 (PsbO) protein reveals replacement of a nuclear-encoded plastid gene by that of a haptophyte tertiary endosymbiont. Proceedings of the National Academy of Sciences, 99(14), 9294-9299. https://doi.org/10.1073/pnas.142091799 Jeng, M.-S., Huang, H.-D., Dai, C.-F., Hsiao, Y.-C., & Benayahu, Y. (2011). Sclerite calcification and reef-building in the fleshy octocoral genus Sinularia (Octocorallia: Alcyonacea). Coral Reefs, 30(4), 925-933. https://doi.org/10.1007/s00338-011-0765-z Jiang, J., Zhang, H., Kang, Y., Bina, D., Lo, C. S., & Blankenship, R. E. (2012). Characterization of the peridinin-chlorophyll a-protein complex in the dinoflagellate Symbiodinium. Biochimica et Biophysica Acta, 1817(7), 983-989. https://doi.org/10.1016/j.bbabio.2012.03.027 Jiang, J., Zhang, H., Orf, G. S., Lu, Y., Xu, W., Harrington, L. B., Liu, H., Lo, C. S., & Blankenship, R. E. (2014). Evidence of functional trimeric chlorophyll a/c2-peridinin proteins in the dinoflagellate Symbiodinium. Biochimica et Biophysica Acta, 1837(11), 1904-1912. https://doi.org/10.1016/j.bbabio.2014.07.023 Jimbo, M., Suda, Y., Koike, K., Nakamura-Tsuruta, S., Kominami, J., Kamei, M., Hirabayashi, J., Sakai, R., & Kamiya, H. (2013). Possible involvement of glycolipids in lectin-mediated cellular transformation of symbiotic microalgae in corals. Journal of Experimental Marine Biology and Ecology, 439, 129-135. https://doi.org/10.1016/j.jembe.2012.10.022 Jimbo, M., Yamashita, H., Koike, K., Sakai, R., & Kamiya, H. (2010). Effects of lectin in the scleractinian coral Ctenactis echinata on symbiotic zooxanthellae. Fisheries Science, 76(2), 355-363. https://doi.org/10.1007/s12562-009-0204-z Jimbo, M., Yanohara, T., Koike, K., Koike, K., Sakai, R., Muramoto, K., & Kamiya, H. (2000). The D-galactose-binding lectin of the octocoral Sinularia lochmodes: characterization and possible relationship to the symbiotic dinoflagellates. Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology, 125(2), 227-236. https://doi.org/10.1016/s0305-0491(99)00173-x Jokiel, P., & Coles, S. (1990). Response of Hawaiian and other Indo-Pacific reef corals to elevated temperature. Coral Reefs, 8(4), 155-162. https://doi.org/10.1007/BF00265006 Jones, R. J. (2004). Testing the ‘photoinhibition’model of coral bleaching using chemical inhibitors. Marine Ecology Progress Series, 284, 133-145. https://doi.org/10.3354/meps284133 Jones, R. J., Hoegh‐Guldberg, O., Larkum, A. W., & Schreiber, U. (1998). Temperature‐induced bleaching of corals begins with impairment of the CO2 fixation mechanism in zooxanthellae. Plant, Cell & Environment, 21(12), 1219-1230. https://doi.org/10.1046/j.1365-3040.1998.00345.x Joy, A., Anoop, P., Rajesh, R., Mathew, A., & Gopinath, A. (2020). Spatial distribution and contamination assessment of trace metals in the coral reef sediments of Kavaratti Island in Lakshadweep Archipelago, Indian Ocean. Soil and Sediment Contamination: An International Journal, 29(2), 209-231. https://doi.org/10.1080/15320383.2019.1699899 Kaku, H., Tanaka, Y., Tazaki, K., Minami, E., Mizuno, H., & Shibuya, N. (1996). Sialylated oligosaccharide-specific plant lectin from Japanese elderberry (Sambucus sieboldiana) bark tissue has a homologous structure to type II ribosome-inactivating proteins, ricin and abrin: cDNA cloning and molecular modeling study. Journal of Biological Chemistry, 271(3), 1480-1485. https://doi.org/10.1074/jbc.271.3.1480 Kamikawa, R., Yazaki, E., Tahara, M., Sakura, T., Matsuo, E., Nagamune, K., Hashimoto, T., & Inagaki, Y. (2018). Fates of evolutionarily distinct, plastid-type glyceraldehyde 3-phosphate dehydrogenase genes in kareniacean dinoflagellates. Journal of Eukaryotic Microbiology, 65(5), 669-678. https://doi.org/10.1111/jeu.12512 Karlsson, A., Christenson, K., Matlak, M., Björstad, Å., Brown, K. L., Telemo, E., Salomonsson, E., Leffler, H., & Bylund, J. (2009). Galectin-3 functions as an opsonin and enhances the macrophage clearance of apoptotic neutrophils. Glycobiology, 19(1), 16-20. https://doi.org/10.1093/glycob/cwn104 Kato, H., Tokutsu, R., Kubota-Kawai, H., Burton-Smith, R. N., Kim, E., & Minagawa, J. (2020). Characterization of a giant PSI supercomplex in the symbiotic dinoflagellate symbiodiniaceae. Plant Physiology, 183(4), 1725-1734. https://doi.org/10.1104/pp.20.00726 Kavelaki, K., & Ghanotakis, D. F. (1991). Effect of the manganese complex on the binding of the extrinsic proteins (17, 23 and 33 kDa) of Photosystem II. Photosynthesis Research, 29(3), 149-155. https://doi.org/10.1007/BF00036218 Kimura, A., Sakaguchi, E., & Nonaka, M. (2009). Multi-component complement system of Cnidaria: C3, Bf, and MASP genes expressed in the endodermal tissues of a sea anemone, Nematostella vectensis. Immunobiology, 214(3), 165-178. https://doi.org/10.1016/j.imbio.2009.01.003 Kirkeby, S., Hansen, A. K., d'Apice, A., & Moe, D. (2006). The galactophilic lectin (PA-IL, gene LecA) from Pseudomonas aeruginosa. Its binding requirements and the localization of lectin receptors in various mouse tissues. Microbial Pathogenesis, 40(5), 191-197. https://doi.org/10.1016/j.micpath.2006.01.006 Kirkeby, S., Wimmerová, M., Moe, D., & Hansen, A. K. (2007). The mink as an animal model for Pseudomonas aeruginosa adhesion: binding of the bacterial lectins (PA-IL and PA-IIL) to neoglycoproteins and to sections of pancreas and lung tissues from healthy mink. Microbes and Infection, 9(5), 566-573. https://doi.org/10.1016/j.micinf.2007.01.025 Knowlton, N., Brainard, R. E., Fisher, R., Moews, M., Plaisance, L., & Caley, M. J. (2010). Coral reef biodiversity. Life in the world’s oceans: diversity distribution and abundance (pp. 65-74): Blackwell Publishing. https://doi.org/10.1002/9781444325508 Koya, R. C., Fujita, H., Shimizu, S., Ohtsu, M., Takimoto, M., Tsujimoto, Y., & Kuzumaki, N. (2000). Gelsolin inhibits apoptosis by blocking mitochondrial membrane potential loss and cytochrome c release. Journal of Biological Chemistry, 275(20), 15343-15349. https://doi.org/10.1074/jbc.275.20.15343 Krarup, A., Thiel, S., Hansen, A., Fujita, T., & Jensenius, J. C. (2004). L-ficolin is a pattern recognition molecule specific for acetyl groups. Journal of Biological Chemistry, 279(46), 47513-47519. https://doi.org/10.1074/jbc.M407161200 Kumar, G., & Surolia, A. (2017). Comprehensive analysis of α 2–3-linked sialic acid specific Maackia amurensis leukagglutinin reveals differentially occupied N-glycans and C-terminal processing. International Journal of Biological Macromolecules, 94, 114-121. https://doi.org/10.1016/j.ijbiomac.2016.10.007 Kuniya, N., Jimbo, M., Tanimoto, F., Yamashita, H., Koike, K., Harii, S., Nakano, Y., Iwao, K., Yasumoto, K., & Watabe, S. (2015). Possible involvement of tachylectin-2-like lectin from Acropora tenuis in the process of Symbiodinium acquisition. Fisheries Science, 81(3), 473-483. https://doi.org/10.1007/s12562-015-0862-y Kusano, H., Shimizu, S., Koya, R. C., Fujita, H., Kamada, S., Kuzumaki, N., & Tsujimoto, Y. (2000). Human gelsolin prevents apoptosis by inhibiting apoptotic mitochondrial changes via closing VDAC. Oncogene, 19(42), 4807-4814. https://doi.org/10.1038/sj.onc.1203868 Kvennefors, E. C., Leggat, W., Kerr, C. C., Ainsworth, T. D., Hoegh-Guldberg, O., & Barnes, A. C. (2010). Analysis of evolutionarily conserved innate immune components in coral links immunity and symbiosis. Developmental & Comparative Immunology, 34(11), 1219-1229. https://doi.org/10.1016/j.dci.2010.06.016 Kvennefors, E. C. E., Leggat, W., Hoegh-Guldberg, O., Degnan, B. M., & Barnes, A. C. (2008). An ancient and variable mannose-binding lectin from the coral Acropora millepora binds both pathogens and symbionts. Developmental & Comparative Immunology, 32(12), 1582-1592. Kvicalova, Z., Alster, J., Hofmann, E., Khoroshyy, P., Litvin, R., Bina, D., Polivka, T., & Psencik, J. (2016). Triplet-triplet energy transfer from chlorophylls to carotenoids in two antenna complexes from dinoflagellate Amphidinium carterae. Biochimica et Biophysica Acta, 1857(4), 341-349. https://doi.org/10.1016/j.bbabio.2016.01.008 LaJeunesse, T. C. (2001). Investigating the biodiversity, ecology, and phylogeny of endosymbiotic dinoflagellates in the genus Symbiodinium using the ITS region: in search of a “species” level marker. Journal of Phycology, 37(5), 866-880. https://doi.org/10.1046/j.1529-8817.2001.01031.x LaJeunesse, T. C., Parkinson, J. E., Gabrielson, P. W., Jeong, H. J., Reimer, J. D., Voolstra, C. R., & Santos, S. R. (2018). Systematic revision of symbiodiniaceae highlights the antiquity and diversity of coral endosymbionts. Current Biology, 28(16), e2576, 2570-2580. https://doi.org/10.1016/j.cub.2018.07.008 Laloi, C., & Havaux, M. (2015). Key players of singlet oxygen-induced cell death in plants. Frontiers in Plant Science, 6(39), 1-9. https://doi.org/10.3389/fpls.2015.00039 Lange, C., Hemmrich, G., Klostermeier, U. C., López-Quintero, J. A., Miller, D. J., Rahn, T., Weiss, Y., Bosch, T. C., & Rosenstiel, P. (2011). Defining the origins of the NOD-like receptor system at the base of animal evolution. Molecular Biology and Evolution, 28(5), 1687-1702. https://doi.org/10.1093/molbev/msq349 Leal, M. C., Nunes, C., Engrola, S., Dinis, M. T., & Calado, R. (2012). Optimization of monoclonal production of the glass anemone Aiptasia pallida (Agassiz in Verrill, 1864). Aquaculture, 354, 91-96. https://doi.org/10.1016/j.aquaculture.2012.03.035 Lee, W.-H., Pathanibul, P., Quarterman, J., Jo, J.-H., Han, N. S., Miller, M. J., Jin, Y.-S., & Seo, J.-H. (2012). Whole cell biosynthesis of a functional oligosaccharide, 2′-fucosyllactose, using engineered Escherichia coli. Microbial Cell Factories, 11(1), 1-9. https://doi.org/10.1186/1475-2859-11-48 Leggat, W., Yellowlees, D., & Medina, M. (2011). Recent progress in Symbiodinium transcriptomics. Journal of Experimental Marine Biology and Ecology, 408(1-2), 120-125. https://doi.org/10.1016/j.jembe.2011.07.032 Lehnert, E. M., Mouchka, M. E., Burriesci, M. S., Gallo, N. D., Schwarz, J. A., & Pringle, J. R. (2014). Extensive differences in gene expression between symbiotic and aposymbiotic cnidarians. G3: Genes, Genomes, Genetics, 4(2), 277-295. https://doi.org/10.1534/g3.113.009084 Lepetit, B., Volke, D., Gilbert, M., Wilhelm, C., & Goss, R. (2010). Evidence for the existence of one antenna-associated, lipid-dissolved and two protein-bound pools of diadinoxanthin cycle pigments in diatoms. Plant Physiology, 154(4), 1905-1920. https://doi.org/10.1104/pp.110.166454 Lepetit, B., Volke, D., Szabo, M., Hoffmann, R., Garab, G., Wilhelm, C., & Goss, R. (2007). Spectroscopic and molecular characterization of the oligomeric antenna of the diatom Phaeodactylum tricornutum. Biochemistry, 46(34), 9813-9822. https://doi.org/10.1021/bi7008344 Lesser, M. P. (1996). Elevated temperatures and ultraviolet radiation cause oxidative stress and inhibit photosynthesis in ymbiotic dinoflagellates. Limnology and Oceanography, 41(2), 271-283. https://doi.org/10.4319/lo.1996.41.2.0271 Lesser, M. P. (1997). Oxidative stress causes coral bleaching during exposure to elevated temperatures. Coral Reefs, 16(3), 187-192. https://doi.org/10.1007/s003380050073 Lesser, M. P. Coral bleaching: causes and mechanisms. Coral Reefs: an ecosystem in transition (pp. 405-419): Springer, Dordrecht. https://doi.org/10.1007/978-94-007-0114-4_23 Lesser, M. P., & Farrell, J. H. (2004). Exposure to solar radiation increases damage to both host tissues and algal symbionts of corals during thermal stress. Coral Reefs, 23(3), 367-377. https://doi.org/10.1007/s00338-004-0392-z Levy, O., Achituv, Y., Yacobi, Y., Dubinsky, Z., & Stambler, N. (2006). Dieltuning'of coral metabolism: physiological responses to light cues. Journal of Experimental Biology, 209(2), 273-283. https://doi.org/10.1242/jeb.01983 Lewis, A. L., & Lewis, W. G. (2012). Host sialoglycans and bacterial sialidases: a mucosal perspective. Cellular Microbiology, 14(8), 1174-1182. https://doi.org/10.1111/j.1462-5822.2012.01807.x Li, Y., & Chen, X. (2012). Sialic acid metabolism and sialyltransferases: natural functions and applications. Applied Microbiology and Biotechnology, 94(4), 887-905. https://doi.org/10.1007/s00253-012-4040-1 Lin, K.-L., Wang, J.-T., & Fang, L.-S. (2000). Participation of glycoproteins on zooxanthellal cell walls in the establishment of a symbiotic relationship with the sea anemone, Aiptasia pulchella. Zoological Studies, 39(3), 172-178. Liu, J. Y., He, Z. D., Leung, D. W. M., Zeng, S. S., Cui, L. L., & Peng, X. X. (2022). Molecular, biochemical and enzymatic characterization of photorespiratory 2-phosphoglycolate phosphatase (PGLP1) in rice. Plant Biology, 24(3), 510-516. https://doi.org/10.1111/plb.13389 Liu, T., Liu, Z., Song, C., Hu, Y., Han, Z., She, J., Fan, F., Wang, J., Jin, C., Chang, J., Zhou, J. M., & Chai, J. (2012). Chitin-induced dimerization activates a plant immune receptor. Science, 336(6085), 1160-1164. https://doi.org/10.1126/science.1218867 Logan, D. D., LaFlamme, A. C., Weis, V. M., & Davy, S. K. (2010). Flow‐cytometric characterization of the cell‐surface glycans of symbiotic dinoflagellates (Symbiodinium spp.). Journal of Phycology, 46(3), 525-533. https://doi.org/10.1111/j.1529-8817.2010.00819.x Long, S., Humphries, S., & Falkowski, P. G. (1994). Photoinhibition of photosynthesis in nature. Annual Review of Plant Biology, 45(1), 633-662. https://doi.org/10.1146/annurev.pp.45.060194.003221 Loo, Y. M., & Gale, M., Jr. (2011). Immune signaling by RIG-I-like receptors. Immunity, 34(5), 680-692. https://doi.org/10.1016/j.immuni.2011.05.003 Matthews, J. L., Sproles, A. E., Oakley, C. A., Grossman, A. R., Weis, V. M., & Davy, S. K. (2016). Menthol-induced bleaching rapidly and effectively provides experimental aposymbiotic sea anemones (Aiptasia sp.) for symbiosis investigations. Journal of Experimental Biology, 219(Pt 3), 306-310. https://doi.org/10.1242/jeb.128934 Mayfield, A. B., Aguilar, C., Kolodziej, G., Enochs, I. C., & Manzello, D. P. (2021). Shotgun proteomic analysis of thermally challenged reef corals. Frontiers in Marine Science, 547, 1-14. https://doi.org/10.3389/fmars.2021.660153 McGinley, M. P., Aschaffenburg, M. D., Pettay, D. T., Smith, R. T., LaJeunesse, T. C., & Warner, M. E. (2012). Transcriptional response of two core photosystem genes in Symbiodinium spp. exposed to thermal stress. Public Library of Science One, 7(12), e50439, 1-9. https://doi.org/10.1371/journal.pone.0050439 McGough, A. M., Staiger, C. J., Min, J. K., & Simonetti, K. D. (2003). The gelsolin family of actin regulatory proteins: modular structures, versatile functions. Federation of European Biochemical Societies Letters, 552(2-3), 75-81. https://doi.org/10.1016/s0014-5793(03)00932-3 Medrano, E., Merselis, D. G., Bellantuono, A. J., & Rodriguez-Lanetty, M. (2019). Proteomic basis of symbiosis: A heterologous partner fails to duplicate homologous colonization in a novel cnidarian- symbiodiniaceae mutualism. Frontiers in Microbiology, 10, 1153, 1-15. https://doi.org/10.3389/fmicb.2019.01153 Merle, P. L., Sabourault, C., Richier, S., Allemand, D., & Furla, P. (2007). Catalase characterization and implication in bleaching of a symbiotic sea anemone. Free Radical Biology and Medicine, 42(2), 236-246. https://doi.org/10.1016/j.freeradbiomed.2006.10.038 Miller, D. J., Catmull, J., Puskeiler, R., Tweedale, H., Sharples, F. P., & Hiller, R. G. (2005). Reconstitution of the peridinin-chlorophyll a protein (PCP): evidence for functional flexibility in chlorophyll binding. Photosynthesis Research, 86(1-2), 229-240. https://doi.org/10.1007/s11120-005-2067-1 Miller, J., Muller, E., Rogers, C., Waara, R., Atkinson, A., Whelan, K., Patterson, M., & Witcher, B. (2009). Coral disease following massive bleaching in 2005 causes 60% decline in coral cover on reefs in the US Virgin Islands. Coral Reefs, 28(4), 925-937. Moons, S. J., Adema, G. J., Derks, M. T., Boltje, T. J., & Büll, C. (2019). Sialic acid glycoengineering using N-acetylmannosamine and sialic acid analogs. Glycobiology, 29(6), 433-445. https://doi.org/10.1093/glycob/cwz026 Moore, S. (1989). Narcotising sea anemones. Journal of the Marine Biological Association of the United Kingdom, 69(4), 803-811. https://doi.org/10.1017/S0025315400032173 Moreno, E., Teneberg, S., Adar, R., Sharon, N., Karlsson, K.-A., & Ångström, J. (1997). Redefinition of the carbohydrate specificity of erythrina corallodendron lectin based on solid-phase binding assays and molecular modeling of native and recombinant forms obtained by site-directed mutagenesis. Biochemistry, 36(15), 4429-4437. https://doi.org/10.1021/bi962231h Morita, M., & Imanaka, T. (2012). Peroxisomal ABC transporters: structure, function and role in disease. Biochimica et Biophysica Acta, 1822(9), 1387-1396. https://doi.org/10.1016/j.bbadis.2012.02.009 Muller, W. H., Lorber, P., Haley, B., & Johnson, K. (1969). Volatile growth inhibitors produced by Salvia leucophylla: effect on oxygen uptake by mitochondrial suspensions. Bulletin of the Torrey Botanical Club, 89-96. https://doi.org/10.2307/2484011 Muscatine, L., Falkowski, P., Porter, J., & Dubinsky, Z. (1984). Fate of photosynthetic fixed carbon in light-and shade-adapted colonies of the symbiotic coral Stylophora pistillata. Proceedings of the Royal Society of London. Series B. Biological Sciences, 222(1227), 181-202. https://doi.org/10.1098/rspb.1984.0058 Nagao, R., Yokono, M., Akimoto, S., & Tomo, T. (2013). High excitation energy quenching in fucoxanthin chlorophyll a/c-binding protein complexes from the diatom Chaetoceros gracilis. Journal of Physical Chemistry B, 117(23), 6888-6895. https://doi.org/10.1021/jp403923q Nash, E. A., Nisbet, R. E. R., Barbrook, A. C., & Howe, C. J. (2008). Dinoflagellates: a mitochondrial genome all at sea. Trends in Genetics, 24(7), 328-335. https://doi.org/10.1016/j.tig.2008.04.001 Niedzwiedzki, D. M., Jiang, J., Lo, C. S., & Blankenship, R. E. (2014). Spectroscopic properties of the chlorophyll a-chlorophyll c2-peridinin-protein-complex (acpPC) from the coral symbiotic dinoflagellate Symbiodinium. Photosynthesis Research, 120(1-2), 125-139. https://doi.org/10.1007/s11120-013-9794-5 Oakley, C. A., Ameismeier, M. F., Peng, L., Weis, V. M., Grossman, A. R., & Davy, S. K. (2016). Symbiosis induces widespread changes in the proteome of the model cnidarian Aiptasia. Cellular Microbiology, 18(7), 1009-1023. https://doi.org/10.1111/cmi.12564 Parkinson, J. E., Tivey, T. R., Mandelare, P. E., Adpressa, D. A., Loesgen, S., & Weis, V. M. (2018). Subtle differences in symbiont cell surface glycan profiles do not explain species-specific colonization rates in a model cnidarian-algal symbiosis. Frontiers in Microbiology, 9, 842, 1-12. https://doi.org/10.3389/fmicb.2018.00842 Passos da Silva, D., Matwichuk, M. L., Townsend, D. O., Reichhardt, C., Lamba, D., Wozniak, D. J., & Parsek, M. R. (2019). The Pseudomonas aeruginosa lectin LecB binds to the exopolysaccharide Psl and stabilizes the biofilm matrix. Nature Communications, 10(1), 2183, 1-11. https://doi.org/10.1038/s41467-019-10201-4 Peng, W., & Paulson, J. C. (2017). CD22 Ligands on a natural N-glycan scaffold efficiently deliver toxins to B-lymphoma cells. Journal of the American Chemical Society, 139(36), 12450-12458. https://doi.org/10.1021/jacs.7b03208 Piccirillo, C., Khanna, R., & Kiledjian, M. (2003). Functional characterization of the mammalian mRNA decapping enzyme hDcp2. Rna, 9(9), 1138-1147. https://doi.org/10.1261/rna.5690503 Pochon, X., & Gates, R. D. (2010). A new Symbiodinium clade (dinophyceae) from soritid foraminifera in Hawai'i. Molecular Phylogenetics and Evolution, 56(1), 492-497. https://doi.org/10.1016/j.ympev.2010.03.040 Polívka, T., & Hofmann, E. Structure-function relationship in peridinin-chlorophyll proteins. The Structural Basis of Biological Energy Generation (pp. 39-58): Springer. https://doi.org/10.1007/978-94-017-8742-0_3 Poole, A. Z., & Weis, V. M. (2014). TIR-domain-containing protein repertoire of nine anthozoan species reveals coral-specific expansions and uncharacterized proteins. Developmental & Comparative Immunology, 46(2), 480-488. https://doi.org/10.1016/j.dci.2014.06.002 Rahman, M. A., Oomori, T., & Wörheide, G. (2011). Calcite formation in soft coral sclerites is determined by a single reactive extracellular protein. Journal of Biological Chemistry, 286(36), 31638-31649. https://doi.org/10.1074/jbc.M109.070185 Redding, J. E., Myers-Miller, R. L., Baker, D. M., Fogel, M., Raymundo, L. J., & Kim, K. (2013). Link between sewage-derived nitrogen pollution and coral disease severity in Guam. Marine Pollution Bulletin, 73(1), 57-63. https://doi.org/10.1016/j.marpolbul.2013.06.002 Rehwinkel, J., & Gack, M. U. (2020). RIG-I-like receptors: their regulation and roles in RNA sensing. Nature Reviews Immunology, 20(9), 537-551. https://doi.org/10.1038/s41577-020-0288-3 Reichman, J. R., Wilcox, T. P., & Vize, P. D. (2003). PCP gene family in Symbiodinium from Hippopus hippopus: low levels of concerted evolution, isoform diversity, and spectral tuning of chromophores. Molecular Biology and Evolution, 20(12), 2143-2154. https://doi.org/10.1093/molbev/msg233 Reopanichkul, P., Carter, R. W., Worachananant, S., & Crossland, C. J. (2010). Wastewater discharge degrades coastal waters and reef communities in southern Thailand. Marine Environmental Research, 69(5), 287-296. https://doi.org/10.1016/j.marenvres.2009.11.011 Reynolds, W. S., Schwarz, J. A., & Weis, V. M. (2000). Symbiosis-enhanced gene expression in cnidarian-algal associations: cloning and characterization of a cDNA, sym32, encoding a possible cell adhesion protein. Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology, 126(1), 33-44. https://doi.org/10.1016/s0742-8413(00)00099-2 Ricci, C. A., Kamal, A. H., Chakrabarty, J. K., Ledbetter, B. E., Chowdhury, S. M., & Mydlarz, L. D. (2020). The cell-surface protein composition of a coral symbiont, Breviolum psygmophilum, reveals a mechanism for host specificity and displays dynamic regulation during temperature stress. Marine Biology, 167(5), 1-20. https://doi.org/10.1007/s00227-020-03680-3 Richier, S., Furla, P., Plantivaux, A., Merle, P. L., & Allemand, D. (2005). Symbiosis-induced adaptation to oxidative stress. Journal of Experimental Biology, 208(Pt 2), 277-285. https://doi.org/10.1242/jeb.01368 Richier, S., Sabourault, C., Courtiade, J., Zucchini, N., Allemand, D., & Furla, P. (2006). Oxidative stress and apoptotic events during thermal stress in the symbiotic sea anemone, Anemonia viridis. Federation of European Biochemical Societies Journal, 273(18), 4186-4198. https://doi.org/10.1111/j.1742-4658.2006.05414.x Roberty, S., Furla, P., & Plumier, J. C. (2016). Differential antioxidant response between two Symbiodinium species from contrasting environments. Plant, Cell & Environment, 39(12), 2713-2724. https://doi.org/10.1111/pce.12825 Rodriguez-Lanetty, M., Phillips, W. S., & Weis, V. M. (2006). Transcriptome analysis of a cnidarian-dinoflagellate mutualism reveals complex modulation of host gene expression. BMC Genomics, 7(1), 23, 1-11. https://doi.org/10.1186/1471-2164-7-23 Rosic, N. N., & Dove, S. (2011). Mycosporine-like amino acids from coral dinoflagellates. Applied and Environmental Microbiology, 77(24), 8478-8486. https://doi.org/10.1128/AEM.05870-11 Russnak, V., Rodriguez-Lanetty, M., & Karsten, U. (2021). Photophysiological tolerance and thermal plasticity of genetically different symbiodiniaceae endosymbiont species of cnidaria. Frontiers in Marine Science, 323, 1-15. https://doi.org/10.3389/fmars.2021.657348 Salih, A., Larkum, A., Cox, G., Kuhl, M., & Hoegh-Guldberg, O. (2000). Fluorescent pigments in corals are photoprotective. Nature, 408(6814), 850-853. https://doi.org/10.1038/35048564 Schulte, T., Johanning, S., & Hofmann, E. (2010). Structure and function of native and refolded peridinin-chlorophyll-proteins from dinoflagellates. European Journal of Cell Biology, 89(12), 990-997. https://doi.org/10.1016/j.ejcb.2010.08.004 Schultz-Johansen, M., Stougaard, P., Svensson, B., & Teze, D. (2022). Characterization of five marine family 29 glycoside hydrolases reveals an alpha-L-fucosidase targeting specifically Fuc (alpha1,4) GlcNAc. Glycobiology, 32(6), 529-539. https://doi.org/10.1093/glycob/cwab132 Seidler, A. (1996). Intermolecular and intramolecular interactions of the 33-kDa protein in photosystem II. European Journal of Biochemistry, 242(3), 485-490. https://doi.org/10.1111/j.1432-1033.1996.0485r.x Seth, R. B., Sun, L., Ea, C.-K., & Chen, Z. J. (2005). Identification and characterization of MAVS, a mitochondrial antiviral signaling protein that activates NF-κB and IRF3. Cell, 122(5), 669-682. https://doi.org/10.1016/j.cell.2005.08.012. Shafi, R., Iyer, S. P. N., Ellies, L. G., O'Donnell, N., Marek, K. W., Chui, D., Hart, G. W., & Marth, J. D. (2000). The O-GlcNAc transferase gene resides on the X chromosome and is essential for embryonic stem cell viability and mouse ontogeny. Proceedings of the National Academy of Sciences, 97(11), 5735-5739. https://doi.org/10.1073/pnas.100471497 Sharples, F. P., Wrench, P. M., Ou, K., & Hiller, R. G. (1996). Two distinct forms of the peridinin-chlorophyll a-protein from Amphidinium carterae. Biochimica et Biophysica Acta, 1276(2), 117-123. https://doi.org/10.1016/0005-2728(96)00066-7 Shick, J. M., Dunlap, W. C., Pearse, J. S., & Pearse, V. B. (2002). Mycosporine-like amino acid content in four species of sea anemones in the genus Anthopleura reflects phylogenetic but not environmental or symbiotic relationships. The Biological Bulletin, 203(3), 315-330. https://doi.org/ 10.2307/1543574 Shick, J. M., Lesser, M. P., & Jokiel, P. L. (1996). Effects of ultraviolet radiation on corals and other coral reef organisms. Global Change Biology, 2(6), 527-545. https://doi.org/10.1039/B902763G Stat, M., & Gates, R. D. (2011). Clade D Symbiodinium in scleractinian corals: a “nugget” of hope, a selfish opportunist, an ominous sign, or all of the above? Journal of Marine Biology, 2011, 730715, 1-10. https://doi.org/10.1155/2011/730715 Steen, R. G., & Muscatine, L. (1987). Low temperature evokes rapid exocytosis of symbiotic algae by a sea anemone. The Biological Bulletin, 172(2), 246-263. https://doi.org/10.2307/1541797 Stochaj, W. R., & Grossman, A. R. (1997). Differences in the protein profiles of cultured and endosymbiotic Symbiodinium sp. (Pyrrophyta) from the anemone Aiptasia pallida (Anthozoa). Journal of Phycology, 33(1), 44-53. https://doi.org/10.1111/j.0022-3646.1997.00044.x Strojsova, A., & Dyhrman, S. T. (2008). Cell-specific beta-N-acetylglucosaminidase activity in cultures and field populations of eukaryotic marine phytoplankton. Federation of Learned Microbiology Societies Microbiology Ecology, 64(3), 351-361. https://doi.org/10.1111/j.1574-6941.2008.00479.x Sugihara, K., Hanagata, N., Dubinsky, Z., Baba, S., & Karube, I. (2000). Molecular characterization of cDNA encoding oxygen evolving enhancer protein 1 increased by salt treatment in the mangrove Bruguiera gymnorrhiza. Plant and Cell Physiology, 41(11), 1279-1285. https://doi.org/10.1093/pcp/pcd061 Sukumaran, P., Nascimento Da Conceicao, V., Sun, Y., Ahamad, N., Saraiva, L. R., Selvaraj, S., & Singh, B. B. (2021). Calcium signaling regulates autophagy and apoptosis. Cells, 10(8), 2125, 1-20. https://doi.org/10.3390/cells10082125 Sunagawa, S., Wilson, E. C., Thaler, M., Smith, M. L., Caruso, C., Pringle, J. R., Weis, V. M., Medina, M., & Schwarz, J. A. (2009). Generation and analysis of transcriptomic resources for a model system on the rise: the sea anemone Aiptasia pallida and its dinoflagellate endosymbiont. BMC Genomics, 10(1), 258, 1-10. https://doi.org/10.1186/1471-2164-10-258 Supasri, K. M., Kumar, M., Segečová, A., McCauley, J. I., Herdean, A., Padula, M. P., O’Meara, T., & Ralph, P. J. (2021). Characterisation and bioactivity analysis of peridinin-chlorophyll a-Protein (PCP) isolated from Symbiodinium tridacnidorum CS-73. Journal of Marine Science and Engineering, 9(12), 1387, 1-17. https://doi.org/10.3390/jmse9121387 Takahashi, S., Nakamura, T., Sakamizu, M., Woesik, R. v., & Yamasaki, H. (2004). Repair machinery of symbiotic photosynthesis as the primary target of heat stress for reef-building corals. Plant and Cell Physiology, 45(2), 251-255. https://doi.org/10.1093/pcp/pch028 Takahashi, S., Whitney, S., Itoh, S., Maruyama, T., & Badger, M. (2008). Heat stress causes inhibition of the de novo synthesis of antenna proteins and photobleaching in cultured Symbiodinium. Proceedings of the National Academy of Sciences of the United States of America, 105(11), 4203-4208. https://doi.org/10.1073/pnas.0708554105 Takahashi, S., Whitney, S. M., & Badger, M. R. (2009). Different thermal sensitivity of the repair of photodamaged photosynthetic machinery in cultured Symbiodinium species. Proceedings of the National Academy of Sciences of the United States of America, 106(9), 3237-3242. https://doi.org/10.1073/pnas.0808363106 Takishita, K., Kawachi, M., Noel, M. H., Matsumoto, T., Kakizoe, N., Watanabe, M. M., Inouye, I., Ishida, K., Hashimoto, T., & Inagaki, Y. (2008). Origins of plastids and glyceraldehyde-3-phosphate dehydrogenase genes in the green-colored dinoflagellate Lepidodinium chlorophorum. Gene, 410(1), 26-36. https://doi.org/10.1016/j.gene.2007.11.008 Takishita, K., Patron, N. J., Ishida, K., Maruyama, T., & Keeling, P. J. (2005). A transcriptional fusion of genes encoding glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and enolase in dinoflagellates. Journal of Eukaryotic Microbiology, 52(4), 343-348. https://doi.org/10.1111/j.1550-7408.2005.00042x Tarze, A., Deniaud, A., Le Bras, M., Maillier, E., Molle, D., Larochette, N., Zamzami, N., Jan, G., Kroemer, G., & Brenner, C. (2007). GAPDH, a novel regulator of the pro-apoptotic mitochondrial membrane permeabilization. Oncogene, 26(18), 2606-2620. https://doi.org/10.1038/sj.onc.1210074 Tchernov, D., Gorbunov, M. Y., de Vargas, C., Narayan Yadav, S., Milligan, A. J., Haggblom, M., & Falkowski, P. G. (2004). Membrane lipids of symbiotic algae are diagnostic of sensitivity to thermal bleaching in corals. Proceedings of the National Academy of Sciences of the United States of America, 101(37), 13531-13535. https://doi.org/10.1073/pnas.0402907101 Terada, M., Khoo, K. H., Inoue, R., Chen, C. I., Yamada, K., Sakaguchi, H., Kadowaki, N., Ma, B. Y., Oka, S., Kawasaki, T., & Kawasaki, N. (2005). Characterization of oligosaccharide ligands expressed on SW1116 cells recognized by mannan-binding protein. A highly fucosylated polylactosamine type N-glycan. Journal of Biological Chemistry, 280(12), 10897-10913. https://doi.org/10.1074/jbc.M413092200 Tivey, T. R., Parkinson, J. E., Mandelare, P. E., Adpressa, D. A., Peng, W., Dong, X., Mechref, Y., Weis, V. M., & Loesgen, S. (2020). N-linked surface glycan biosynthesis, composition, inhibition, and function in cnidarian-dinoflagellate symbiosis. Microbial Ecology, 80(1), 223-236. https://doi.org/10.1007/s00248-020-01487-9 Tortorelli, G., Rautengarten, C., Bacic, A., Segal, G., Ebert, B., Davy, S. K., van Oppen, M. J., & McFadden, G. I. (2022). Cell surface carbohydrates of symbiotic dinoflagellates and their role in the establishment of cnidarian–dinoflagellate symbiosis. The International Society for Microbial Ecology Journal, 16(1), 190-199. https://doi.org/10.1038/s41396-021-01059-w Turton, K., Natesh, R., Thiyagarajan, N., Chaddock, J. A., & Acharya, K. R. (2004). Crystal structures of Erythrina cristagalli lectin with bound N-linked oligosaccharide and lactose. Glycobiology, 14(10), 923-929. https://doi.org/10.1093/glycob/cwh114 van Roermund, C. W., Visser, W. F., Ijlst, L., Waterham, H. R., & Wanders, R. J. (2011). Differential substrate specificities of human ABCD1 and ABCD2 in peroxisomal fatty acid beta-oxidation. Biochimica et Biophysica Acta, 1811(3), 148-152. https://doi.org/10.1016/j.bbalip.2010.11.010 Van Treuren, W., Brower, K. K., Labanieh, L., Hunt, D., Lensch, S., Cruz, B., Cartwright, H. N., Tran, C., & Fordyce, P. M. (2019). Live imaging of Aiptasia larvae, a model system for coral and anemone bleaching, using a simple microfluidic device. Scientific Reports, 9(1), 1-11. https://doi.org/10.1038/s41598-019-45167-2 Vanholme, B., Vanholme, R., Turumtay, H., Goeminne, G., Cesarino, I., Goubet, F., Morreel, K., Rencoret, J., Bulone, V., Hooijmaijers, C., De Rycke, R., Gheysen, G., Ralph, J., De Block, M., Meulewaeter, F., & Boerjan, W. (2014). Accumulation of N-acetylglucosamine oligomers in the plant cell wall affects plant architecture in a dose-dependent and conditional manner. Plant Physiology, 165(1), 290-308. https://doi.org/10.1104/pp.113.233742 Vassiliev, I. R., Antonkine, M. L., & Golbeck, J. H. (2001). Iron-sulfur clusters in type I reaction centers. Biochimica et Biophysica Acta, 1507(1-3), 139-160. https://doi.org/10.1016/s0005-2728(01)00197-9 Veith, T., & Büchel, C. (2007). The monomeric photosystem I-complex of the diatom Phaeodactylum tricornutum binds specific fucoxanthin chlorophyll proteins (FCPs) as light-harvesting complexes. Biochimica et Biophysica Acta -Bioenergetics, 1767(12), 1428-1435. https://doi.org/10.1016/j.bbabio.2007.09.004 Venn, A. A., Wilson, M. A., Trapido-Rosenthal, H. G., Keely, B. J., & Douglas, A. E. (2006). The impact of coral bleaching on the pigment profile of the symbiotic alga, Symbiodinium. Plant, Cell & Environment, 29(12), 2133-2142. https://doi.org/10.1111/j.1365-3040.2006.001587.x Walser, P. J., Haebel, P. W., Kunzler, M., Sargent, D., Kues, U., Aebi, M., & Ban, N. (2004). Structure and functional analysis of the fungal galectin CGL2. Structure, 12(4), 689-702. https://doi.org/10.1016/j.str.2004.03.002 Wang, J. T., Chen, Y. Y., Tew, K. S., Meng, P. J., & Chen, C. A. (2012). Physiological and biochemical performances of menthol-induced aposymbiotic corals. Public Library of Science One, 7(9), e46406, 1-9. https://doi.org/10.1371/journal.pone.0046406 Wang, J. T., Keshavmurthy, S., Chu, T. Y., & Chen, C. A. (2017). Diverse responses of Symbiodinium types to menthol and DCMU treatment. PeerJ, 5, e3843, 1-15. https://doi.org/10.7717/peerj.3843 Wang, S.W. (2008). The effects of ultraviolet radiation, salinity and nitrate on the production of mycosporine-like amino acids in Alexandrium minutum Halim (dinoflagellate). Master’s thesis, National Sun Yat-Sen University, Kaohsiung, Taiwan. 1-90. https://hdl.handle.net/11296/hhz7m6 Wang, Z., Jiao, X., Carr-Schmid, A., & Kiledjian, M. (2002). The hDcp2 protein is a mammalian mRNA decapping enzyme. Proceedings of the National Academy of Sciences, 99(20), 12663-12668. https://doi.org/10.1073/pnas.192445599 Ware, J. R., Fautin, D. G., & Buddemeier, R. W. (1996). Patterns of coral bleaching: modeling the adaptive bleaching hypothesis. Ecological Modelling, 84(1-3), 199-214. https://doi.org/10.1016/0304-3800(94)00132-4 Warner, M. E., Fitt, W. K., & Schmidt, G. W. (1999). Damage to photosystem II in symbiotic dinoflagellates: a determinant of coral bleaching. Proceedings of the National Academy of Sciences of the United States of America, 96(14), 8007-8012. https://doi.org/10.1073/pnas.96.14.8007 Shick, J.M., Dunlap, W.C. (2002). Mycosporine-like amino acids and related gradusols: biosynthesis, accumulation, and UV-protective functions in aquatic organisms. Annual Review of Physiology, 64, 223-262. https://doi.org/10.1146/annurev.physiol.64.081501.155802 Weis, V. M. (2008). Cellular mechanisms of Cnidarian bleaching: stress causes the collapse of symbiosis. Journal of Experimental Biology, 211(Pt 19), 3059-3066. https://doi.org/10.1242/jeb.009597 Wolenski, F. S., Garbati, M. R., Lubinski, T. J., Traylor-Knowles, N., Dresselhaus, E., Stefanik, D. J., Goucher, H., Finnerty, J. R., & Gilmore, T. D. (2011). Characterization of the core elements of the NF-kappaB signaling pathway of the sea anemone Nematostella vectensis. Molecular and Cellular Biology, 31(5), 1076-1087. https://doi.org/10.1128/MCB.00927-10 Wood-Charlson, E. M., Hollingsworth, L. L., Krupp, D. A., & Weis, V. M. (2006). Lectin/glycan interactions play a role in recognition in a coral/dinoflagellate symbiosis. Cell Microbiolology, 8(12), 1985-1993. https://doi.org/10.1111/j.1462-5822.2006.00765.x Worthley, D. L., Bardy, P. G., & Mullighan, C. G. (2005). Mannose-binding lectin: biology and clinical implications. Internal Medicine Journal, 35(9), 548-555. https://doi.org/10.1111/j.1445-5994.2005.00908.x Wu, A. M. (2004). Polyvalency of Tn (GalNAcα1→ Ser/Thr) glycotope as a critical factor for Vicia villosa B4 and glycoprotein interactions. Federation of European Biochemical Societies Letters, 562(1-3), 51-58. https://doi.org/10.1016/S0014-5793(04)00180-2 Wu, Y., Zhou, Z., Wang, J., Luo, J., Wang, L., & Zhang, Y. (2019). Temperature regulates the recognition activities of a galectin to pathogen and symbiont in the scleractinian coral Pocillopora damicornis. Developmental & Comparative Immunology, 96, 103-110. https://doi.org/10.1016/j.dci.2019.03.003 Xiang, T., Hambleton, E. A., DeNofrio, J. C., Pringle, J. R., & Grossman, A. R. (2013). Isolation of clonal axenic strains of the symbiotic dinoflagellate Symbiodinium and their growth and host specificity. Journal of Phycology, 49(3), 447-458. https://doi.org/10.1111/jpy.12055 Xiang, T., Nelson, W., Rodriguez, J., Tolleter, D., & Grossman, A. R. (2015). Symbiodinium transcriptome and global responses of cells to immediate changes in light intensity when grown under autotrophic or mixotrophic conditions. The Plant Journal, 82(1), 67-80. https://doi.org/10.1111/tpj.12789 Yang, X., Su, K., Roos, M. D., Chang, Q., Paterson, A. J., & Kudlow, J. E. (2001). O-linkage of N-acetylglucosamine to Sp1 activation domain inhibits its transcriptional capability. Proceedings of the National Academy of Sciences of the United States of America, 98(12), 6611-6616. https://doi.org/10.1073/pnas.111099998 Zhang, Y. J., Zhang, S. F., He, Z. P., Lin, L., & Wang, D. Z. (2015). Proteomic analysis provides new insights into the adaptive response of a dinoflagellate Prorocentrum donghaiense to changing ambient nitrogen. Plant, Cell & Environment, 38(10), 2128-2142. https://doi.org/10.1111/pce.12538
|